PottersWheel

 

  • is a MATLABĀ® toolbox for mechanistic mathematical modeling,
  • allows reaction network or ordinary differential equation (ODE) based modeling,
  • fits a model to several data sets at once (multi-experiment fitting),
  • is numerically fast based on FORTRAN integrators and C MEX ODE files,
  • is accessible via graphical user interfaces, from command line and scripts,
  • determines parameter identifiability and confidence intervals,
  • imports and exports SBML models and supports biochemical network modeling,
  • can be used in a computer cluster
  • comprises 250,000 lines of Matlab and C Code,
  • is intensively used by experimentalists and modelers since 2005,
  • originates from Systems Biology, but is applicable to any ODE based modeling.